Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hist1h2aeC0HKE4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aeC0HKE4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist1h2aeC0HKE4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hist1h2aeC0HKE4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h2aeC0HKE4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h2aeC0HKE4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aeC0HKE4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h2aeC0HKE4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aeC0HKE4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aeC0HKE4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aeC0HKE4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hist1h2aeC0HKE4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist1h2aeC0HKE4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Hist1h2aeC0HKE4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h2aeC0HKE4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h2aeC0HKE4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Hist1h2aeC0HKE4 Nkain2-201ENSMUST00000092602 558 ntBASIC21.08■□□□□ 0.97
Hist1h2aeC0HKE4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Hist1h2aeC0HKE4 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2aeC0HKE4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.06■□□□□ 0.96
Hist1h2aeC0HKE4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Hist1h2aeC0HKE4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h2aeC0HKE4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Hist1h2aeC0HKE4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aeC0HKE4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aeC0HKE4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hist1h2aeC0HKE4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.05■□□□□ 0.96
Hist1h2aeC0HKE4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aeC0HKE4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hist1h2aeC0HKE4 Particl-201ENSMUST00000205370 1560 ntBASIC21.03■□□□□ 0.96
Hist1h2aeC0HKE4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Hist1h2aeC0HKE4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Hist1h2aeC0HKE4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.03■□□□□ 0.96
Hist1h2aeC0HKE4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aeC0HKE4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aeC0HKE4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.02■□□□□ 0.96
Hist1h2aeC0HKE4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2aeC0HKE4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
Hist1h2aeC0HKE4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Hist1h2aeC0HKE4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hist1h2aeC0HKE4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hist1h2aeC0HKE4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h2aeC0HKE4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hist1h2aeC0HKE4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aeC0HKE4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aeC0HKE4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hist1h2aeC0HKE4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aeC0HKE4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2aeC0HKE4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2aeC0HKE4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2aeC0HKE4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aeC0HKE4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aeC0HKE4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2aeC0HKE4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aeC0HKE4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aeC0HKE4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aeC0HKE4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hist1h2aeC0HKE4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.94■□□□□ 0.94
Hist1h2aeC0HKE4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Hist1h2aeC0HKE4 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.93■□□□□ 0.94
Hist1h2aeC0HKE4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h2aeC0HKE4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.91■□□□□ 0.94
Hist1h2aeC0HKE4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms