Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ptchd4B9EKX1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Ptchd4B9EKX1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.41■■□□□ 1.66
Ptchd4B9EKX1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ptchd4B9EKX1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.4■■□□□ 1.66
Ptchd4B9EKX1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.39■■□□□ 1.66
Ptchd4B9EKX1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ptchd4B9EKX1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.39■■□□□ 1.65
Ptchd4B9EKX1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ptchd4B9EKX1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptchd4B9EKX1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ptchd4B9EKX1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptchd4B9EKX1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ptchd4B9EKX1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ptchd4B9EKX1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptchd4B9EKX1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ptchd4B9EKX1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.36■■□□□ 1.65
Ptchd4B9EKX1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.36■■□□□ 1.65
Ptchd4B9EKX1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.36■■□□□ 1.65
Ptchd4B9EKX1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Ptchd4B9EKX1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ptchd4B9EKX1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptchd4B9EKX1 Amer2-203ENSMUST00000225247 2662 ntBASIC25.35■■□□□ 1.65
Ptchd4B9EKX1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ptchd4B9EKX1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptchd4B9EKX1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ptchd4B9EKX1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Gm12366-201ENSMUST00000121722 873 ntBASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Gm5786-201ENSMUST00000085368 882 ntBASIC25.33■■□□□ 1.65
Ptchd4B9EKX1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.32■■□□□ 1.64
Ptchd4B9EKX1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ptchd4B9EKX1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
Ptchd4B9EKX1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Gm9812-201ENSMUST00000061934 968 ntBASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ptchd4B9EKX1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ptchd4B9EKX1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ptchd4B9EKX1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.3■■□□□ 1.64
Ptchd4B9EKX1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ptchd4B9EKX1 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.28■■□□□ 1.64
Ptchd4B9EKX1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptchd4B9EKX1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ptchd4B9EKX1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.27■■□□□ 1.64
Ptchd4B9EKX1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptchd4B9EKX1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ptchd4B9EKX1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptchd4B9EKX1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ptchd4B9EKX1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptchd4B9EKX1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Ptchd4B9EKX1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ptchd4B9EKX1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ptchd4B9EKX1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ptchd4B9EKX1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ptchd4B9EKX1 Gm27502-201ENSMUST00000183495 199 ntBASIC25.22■■□□□ 1.63
Ptchd4B9EKX1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ptchd4B9EKX1 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.22■■□□□ 1.63
Ptchd4B9EKX1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ptchd4B9EKX1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptchd4B9EKX1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ptchd4B9EKX1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ptchd4B9EKX1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.2■■□□□ 1.63
Ptchd4B9EKX1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Ptchd4B9EKX1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptchd4B9EKX1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ptchd4B9EKX1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ptchd4B9EKX1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ptchd4B9EKX1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Ptchd4B9EKX1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptchd4B9EKX1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ptchd4B9EKX1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.18■■□□□ 1.62
Ptchd4B9EKX1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ptchd4B9EKX1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.17■■□□□ 1.62
Ptchd4B9EKX1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptchd4B9EKX1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ptchd4B9EKX1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ptchd4B9EKX1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.16■■□□□ 1.62
Ptchd4B9EKX1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ptchd4B9EKX1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.15■■□□□ 1.62
Ptchd4B9EKX1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ptchd4B9EKX1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
Ptchd4B9EKX1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms