Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.8■■■□□ 2.68
Tmf1B9EKI3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.79■■■□□ 2.68
Tmf1B9EKI3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tmf1B9EKI3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmf1B9EKI3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmf1B9EKI3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmf1B9EKI3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
Tmf1B9EKI3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Tmf1B9EKI3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.77■■■□□ 2.68
Tmf1B9EKI3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Tmf1B9EKI3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Tmf1B9EKI3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
Tmf1B9EKI3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
Tmf1B9EKI3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tmf1B9EKI3 Gm4799-201ENSMUST00000095396 657 ntBASIC31.74■■■□□ 2.67
Tmf1B9EKI3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tmf1B9EKI3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tmf1B9EKI3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC31.72■■■□□ 2.67
Tmf1B9EKI3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tmf1B9EKI3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tmf1B9EKI3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Tmf1B9EKI3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tmf1B9EKI3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tmf1B9EKI3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.71■■■□□ 2.67
Tmf1B9EKI3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tmf1B9EKI3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.71■■■□□ 2.67
Tmf1B9EKI3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tmf1B9EKI3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tmf1B9EKI3 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.68■■■□□ 2.66
Tmf1B9EKI3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tmf1B9EKI3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Tmf1B9EKI3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
Tmf1B9EKI3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Tmf1B9EKI3 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.66■■■□□ 2.66
Tmf1B9EKI3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.65■■■□□ 2.66
Tmf1B9EKI3 Gm6311-201ENSMUST00000073790 878 ntBASIC31.65■■■□□ 2.66
Tmf1B9EKI3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Tmf1B9EKI3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.64■■■□□ 2.66
Tmf1B9EKI3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Tmf1B9EKI3 Mir3960-201ENSMUST00000198213 73 ntBASIC31.63■■■□□ 2.65
Tmf1B9EKI3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC31.63■■■□□ 2.65
Tmf1B9EKI3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Tmf1B9EKI3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.62■■■□□ 2.65
Tmf1B9EKI3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.61■■■□□ 2.65
Tmf1B9EKI3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Tmf1B9EKI3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Tmf1B9EKI3 Gm45364-201ENSMUST00000210883 159 ntBASIC31.59■■■□□ 2.65
Tmf1B9EKI3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.59■■■□□ 2.65
Tmf1B9EKI3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Tmf1B9EKI3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Tmf1B9EKI3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tmf1B9EKI3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.58■■■□□ 2.65
Tmf1B9EKI3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tmf1B9EKI3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Tmf1B9EKI3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC31.57■■■□□ 2.64
Tmf1B9EKI3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tmf1B9EKI3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
Tmf1B9EKI3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tmf1B9EKI3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Tmf1B9EKI3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tmf1B9EKI3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tmf1B9EKI3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
Tmf1B9EKI3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tmf1B9EKI3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmf1B9EKI3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmf1B9EKI3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmf1B9EKI3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tmf1B9EKI3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.52■■■□□ 2.64
Tmf1B9EKI3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.52■■■□□ 2.64
Tmf1B9EKI3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Tmf1B9EKI3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Tmf1B9EKI3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tmf1B9EKI3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tmf1B9EKI3 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.5■■■□□ 2.63
Tmf1B9EKI3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Tmf1B9EKI3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Tmf1B9EKI3 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.49■■■□□ 2.63
Tmf1B9EKI3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tmf1B9EKI3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC31.47■■■□□ 2.63
Tmf1B9EKI3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Tmf1B9EKI3 Gm9812-201ENSMUST00000061934 968 ntBASIC31.46■■■□□ 2.63
Tmf1B9EKI3 Gm4419-202ENSMUST00000226239 1431 ntBASIC31.46■■■□□ 2.63
Tmf1B9EKI3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
Tmf1B9EKI3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
Tmf1B9EKI3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Tmf1B9EKI3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tmf1B9EKI3 Mir6538-201ENSMUST00000183713 110 ntBASIC31.44■■■□□ 2.62
Tmf1B9EKI3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tmf1B9EKI3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tmf1B9EKI3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tmf1B9EKI3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Tmf1B9EKI3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Tmf1B9EKI3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms