Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.17■■□□□ 1.3
Gm28729A0A1B0GSW2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm28729A0A1B0GSW2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.17■■□□□ 1.3
Gm28729A0A1B0GSW2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.16■■□□□ 1.3
Gm28729A0A1B0GSW2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm28729A0A1B0GSW2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm28729A0A1B0GSW2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.15■■□□□ 1.3
Gm28729A0A1B0GSW2 Gm27502-201ENSMUST00000183495 199 ntBASIC23.14■■□□□ 1.29
Gm28729A0A1B0GSW2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm28729A0A1B0GSW2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm28729A0A1B0GSW2 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.13■■□□□ 1.29
Gm28729A0A1B0GSW2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.12■■□□□ 1.29
Gm28729A0A1B0GSW2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.12■■□□□ 1.29
Gm28729A0A1B0GSW2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm28729A0A1B0GSW2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm28729A0A1B0GSW2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm28729A0A1B0GSW2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.11■■□□□ 1.29
Gm28729A0A1B0GSW2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Gm28729A0A1B0GSW2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Gm28729A0A1B0GSW2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Gm28729A0A1B0GSW2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.09■■□□□ 1.29
Gm28729A0A1B0GSW2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.09■■□□□ 1.29
Gm28729A0A1B0GSW2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Gm28729A0A1B0GSW2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Gm28729A0A1B0GSW2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Gm28729A0A1B0GSW2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Gm28729A0A1B0GSW2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm28729A0A1B0GSW2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm28729A0A1B0GSW2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm28729A0A1B0GSW2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Gm28729A0A1B0GSW2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm28729A0A1B0GSW2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.05■■□□□ 1.28
Gm28729A0A1B0GSW2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Gm28729A0A1B0GSW2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.04■■□□□ 1.28
Gm28729A0A1B0GSW2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Gm28729A0A1B0GSW2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm28729A0A1B0GSW2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm28729A0A1B0GSW2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm28729A0A1B0GSW2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.02■■□□□ 1.28
Gm28729A0A1B0GSW2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm28729A0A1B0GSW2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm28729A0A1B0GSW2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Gm28729A0A1B0GSW2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.01■■□□□ 1.27
Gm28729A0A1B0GSW2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm28729A0A1B0GSW2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm9812-201ENSMUST00000061934 968 ntBASIC22.99■■□□□ 1.27
Gm28729A0A1B0GSW2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm28729A0A1B0GSW2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm28729A0A1B0GSW2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm28729A0A1B0GSW2 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.98■■□□□ 1.27
Gm28729A0A1B0GSW2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.98■■□□□ 1.27
Gm28729A0A1B0GSW2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Gm28729A0A1B0GSW2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm28729A0A1B0GSW2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Gm28729A0A1B0GSW2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.97■■□□□ 1.27
Gm28729A0A1B0GSW2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.96■■□□□ 1.27
Gm28729A0A1B0GSW2 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.96■■□□□ 1.27
Gm28729A0A1B0GSW2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm28729A0A1B0GSW2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm28729A0A1B0GSW2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Gm7332-201ENSMUST00000118351 454 ntBASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm28729A0A1B0GSW2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm28729A0A1B0GSW2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Gm28729A0A1B0GSW2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm28729A0A1B0GSW2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm28729A0A1B0GSW2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm28729A0A1B0GSW2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Gm28729A0A1B0GSW2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm28729A0A1B0GSW2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Gm28729A0A1B0GSW2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm28729A0A1B0GSW2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms