Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lnp1A0A1B0GSK3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Lnp1A0A1B0GSK3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lnp1A0A1B0GSK3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lnp1A0A1B0GSK3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lnp1A0A1B0GSK3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lnp1A0A1B0GSK3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lnp1A0A1B0GSK3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lnp1A0A1B0GSK3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lnp1A0A1B0GSK3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lnp1A0A1B0GSK3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.27■□□□□ 0.68
Lnp1A0A1B0GSK3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Lnp1A0A1B0GSK3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lnp1A0A1B0GSK3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lnp1A0A1B0GSK3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lnp1A0A1B0GSK3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lnp1A0A1B0GSK3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lnp1A0A1B0GSK3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lnp1A0A1B0GSK3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lnp1A0A1B0GSK3 Particl-201ENSMUST00000205370 1560 ntBASIC19.23■□□□□ 0.67
Lnp1A0A1B0GSK3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lnp1A0A1B0GSK3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lnp1A0A1B0GSK3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.21■□□□□ 0.67
Lnp1A0A1B0GSK3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lnp1A0A1B0GSK3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lnp1A0A1B0GSK3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lnp1A0A1B0GSK3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Lnp1A0A1B0GSK3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lnp1A0A1B0GSK3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lnp1A0A1B0GSK3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lnp1A0A1B0GSK3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lnp1A0A1B0GSK3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lnp1A0A1B0GSK3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lnp1A0A1B0GSK3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lnp1A0A1B0GSK3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lnp1A0A1B0GSK3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lnp1A0A1B0GSK3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lnp1A0A1B0GSK3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lnp1A0A1B0GSK3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lnp1A0A1B0GSK3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lnp1A0A1B0GSK3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lnp1A0A1B0GSK3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lnp1A0A1B0GSK3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lnp1A0A1B0GSK3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.14■□□□□ 0.65
Lnp1A0A1B0GSK3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lnp1A0A1B0GSK3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lnp1A0A1B0GSK3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Lnp1A0A1B0GSK3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lnp1A0A1B0GSK3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lnp1A0A1B0GSK3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lnp1A0A1B0GSK3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lnp1A0A1B0GSK3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lnp1A0A1B0GSK3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lnp1A0A1B0GSK3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lnp1A0A1B0GSK3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lnp1A0A1B0GSK3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lnp1A0A1B0GSK3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lnp1A0A1B0GSK3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lnp1A0A1B0GSK3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Lnp1A0A1B0GSK3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lnp1A0A1B0GSK3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lnp1A0A1B0GSK3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lnp1A0A1B0GSK3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lnp1A0A1B0GSK3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Lnp1A0A1B0GSK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lnp1A0A1B0GSK3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lnp1A0A1B0GSK3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Lnp1A0A1B0GSK3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lnp1A0A1B0GSK3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lnp1A0A1B0GSK3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.07■□□□□ 0.64
Lnp1A0A1B0GSK3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms