Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3880A0A1B0GSB3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm3880A0A1B0GSB3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm3880A0A1B0GSB3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Gm3880A0A1B0GSB3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm3880A0A1B0GSB3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Gm3880A0A1B0GSB3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm3880A0A1B0GSB3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm3880A0A1B0GSB3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Gm3880A0A1B0GSB3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Gm3880A0A1B0GSB3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm3880A0A1B0GSB3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Gm3880A0A1B0GSB3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm3880A0A1B0GSB3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm3880A0A1B0GSB3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm3880A0A1B0GSB3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm3880A0A1B0GSB3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm3880A0A1B0GSB3 Zfp131-207ENSMUST00000224946 1783 ntBASIC11.62□□□□□ -0.55
Gm3880A0A1B0GSB3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3880A0A1B0GSB3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm3880A0A1B0GSB3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm3880A0A1B0GSB3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Gm3880A0A1B0GSB3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Gm3880A0A1B0GSB3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Gm3880A0A1B0GSB3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Gm3880A0A1B0GSB3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Gm3880A0A1B0GSB3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms