Protein–RNA interactions for Protein: A0A140T8L3

Rpl7a-ps5, Ribosomal protein L7A, pseudogene 5, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl7a-ps5A0A140T8L3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.24■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl7a-ps5A0A140T8L3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.19■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.17■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
Rpl7a-ps5A0A140T8L3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.11■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rpl7a-ps5A0A140T8L3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl7a-ps5A0A140T8L3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms