Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem116A0A0G2JGD3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tmem116A0A0G2JGD3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Tmem116A0A0G2JGD3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem116A0A0G2JGD3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tmem116A0A0G2JGD3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem116A0A0G2JGD3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem116A0A0G2JGD3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem116A0A0G2JGD3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem116A0A0G2JGD3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem116A0A0G2JGD3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.3■□□□□ 0.68
Tmem116A0A0G2JGD3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.3■□□□□ 0.68
Tmem116A0A0G2JGD3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 Gm6311-201ENSMUST00000073790 878 ntBASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.29■□□□□ 0.68
Tmem116A0A0G2JGD3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem116A0A0G2JGD3 Mir3960-201ENSMUST00000198213 73 ntBASIC19.27■□□□□ 0.68
Tmem116A0A0G2JGD3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tmem116A0A0G2JGD3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem116A0A0G2JGD3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem116A0A0G2JGD3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.25■□□□□ 0.67
Tmem116A0A0G2JGD3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem116A0A0G2JGD3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem116A0A0G2JGD3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem116A0A0G2JGD3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.24■□□□□ 0.67
Tmem116A0A0G2JGD3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.24■□□□□ 0.67
Tmem116A0A0G2JGD3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem116A0A0G2JGD3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Tmem116A0A0G2JGD3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem116A0A0G2JGD3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem116A0A0G2JGD3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem116A0A0G2JGD3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.21■□□□□ 0.67
Tmem116A0A0G2JGD3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.21■□□□□ 0.67
Tmem116A0A0G2JGD3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tmem116A0A0G2JGD3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmem116A0A0G2JGD3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem116A0A0G2JGD3 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.19■□□□□ 0.66
Tmem116A0A0G2JGD3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem116A0A0G2JGD3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmem116A0A0G2JGD3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmem116A0A0G2JGD3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem116A0A0G2JGD3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem116A0A0G2JGD3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tmem116A0A0G2JGD3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tmem116A0A0G2JGD3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem116A0A0G2JGD3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem116A0A0G2JGD3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmem116A0A0G2JGD3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Gm9812-201ENSMUST00000061934 968 ntBASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmem116A0A0G2JGD3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmem116A0A0G2JGD3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmem116A0A0G2JGD3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmem116A0A0G2JGD3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmem116A0A0G2JGD3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms