Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.86■□□□□ 0.61
Trav23A0A0G2JG17 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav23A0A0G2JG17 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav23A0A0G2JG17 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav23A0A0G2JG17 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav23A0A0G2JG17 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
Trav23A0A0G2JG17 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav23A0A0G2JG17 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav23A0A0G2JG17 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.83■□□□□ 0.6
Trav23A0A0G2JG17 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Trav23A0A0G2JG17 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav23A0A0G2JG17 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav23A0A0G2JG17 Particl-201ENSMUST00000205370 1560 ntBASIC18.82■□□□□ 0.6
Trav23A0A0G2JG17 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav23A0A0G2JG17 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trav23A0A0G2JG17 Gm11599-201ENSMUST00000118720 878 ntBASIC18.81■□□□□ 0.6
Trav23A0A0G2JG17 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav23A0A0G2JG17 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav23A0A0G2JG17 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav23A0A0G2JG17 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav23A0A0G2JG17 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav23A0A0G2JG17 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav23A0A0G2JG17 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav23A0A0G2JG17 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.8■□□□□ 0.6
Trav23A0A0G2JG17 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav23A0A0G2JG17 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav23A0A0G2JG17 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.78■□□□□ 0.6
Trav23A0A0G2JG17 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav23A0A0G2JG17 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav23A0A0G2JG17 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav23A0A0G2JG17 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav23A0A0G2JG17 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trav23A0A0G2JG17 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav23A0A0G2JG17 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav23A0A0G2JG17 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav23A0A0G2JG17 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trav23A0A0G2JG17 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav23A0A0G2JG17 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav23A0A0G2JG17 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav23A0A0G2JG17 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav23A0A0G2JG17 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav23A0A0G2JG17 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.74■□□□□ 0.59
Trav23A0A0G2JG17 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav23A0A0G2JG17 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav23A0A0G2JG17 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav23A0A0G2JG17 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav23A0A0G2JG17 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav23A0A0G2JG17 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav23A0A0G2JG17 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav23A0A0G2JG17 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav23A0A0G2JG17 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trav23A0A0G2JG17 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav23A0A0G2JG17 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav23A0A0G2JG17 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav23A0A0G2JG17 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav23A0A0G2JG17 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav23A0A0G2JG17 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav23A0A0G2JG17 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav23A0A0G2JG17 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav23A0A0G2JG17 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav23A0A0G2JG17 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.67■□□□□ 0.58
Trav23A0A0G2JG17 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav23A0A0G2JG17 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trav23A0A0G2JG17 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav23A0A0G2JG17 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.65■□□□□ 0.58
Trav23A0A0G2JG17 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav23A0A0G2JG17 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav23A0A0G2JG17 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav23A0A0G2JG17 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav23A0A0G2JG17 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav23A0A0G2JG17 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav23A0A0G2JG17 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav23A0A0G2JG17 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav23A0A0G2JG17 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav23A0A0G2JG17 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms