Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv8-27A0A0G2JF28 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Igkv8-27A0A0G2JF28 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Igkv8-27A0A0G2JF28 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv8-27A0A0G2JF28 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv8-27A0A0G2JF28 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Igkv8-27A0A0G2JF28 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv8-27A0A0G2JF28 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igkv8-27A0A0G2JF28 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv8-27A0A0G2JF28 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv8-27A0A0G2JF28 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv8-27A0A0G2JF28 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Igkv8-27A0A0G2JF28 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv8-27A0A0G2JF28 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv8-27A0A0G2JF28 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Igkv8-27A0A0G2JF28 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 AC166822.3-201ENSMUST00000227394 661 ntBASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv8-27A0A0G2JF28 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv8-27A0A0G2JF28 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv8-27A0A0G2JF28 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv8-27A0A0G2JF28 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv8-27A0A0G2JF28 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Igkv8-27A0A0G2JF28 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv8-27A0A0G2JF28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv8-27A0A0G2JF28 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Igkv8-27A0A0G2JF28 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv8-27A0A0G2JF28 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv8-27A0A0G2JF28 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv8-27A0A0G2JF28 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Igkv8-27A0A0G2JF28 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv8-27A0A0G2JF28 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv8-27A0A0G2JF28 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv8-27A0A0G2JF28 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.47□□□□□ -0.09
Igkv8-27A0A0G2JF28 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv8-27A0A0G2JF28 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv8-27A0A0G2JF28 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.46□□□□□ -0.09
Igkv8-27A0A0G2JF28 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv8-27A0A0G2JF28 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms