Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.59■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Igkv4-50A0A0B4J1J0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Igkv4-50A0A0B4J1J0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.58■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.57■□□□□ 0.72
Igkv4-50A0A0B4J1J0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv4-50A0A0B4J1J0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.55■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.53■□□□□ 0.72
Igkv4-50A0A0B4J1J0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.53■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.53■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Igkv4-50A0A0B4J1J0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.5■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv4-50A0A0B4J1J0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv4-50A0A0B4J1J0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.48■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.47■□□□□ 0.71
Igkv4-50A0A0B4J1J0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv4-50A0A0B4J1J0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv4-50A0A0B4J1J0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gm37136-201ENSMUST00000194368 194 ntBASIC19.4■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv4-50A0A0B4J1J0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.37■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv4-50A0A0B4J1J0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.36■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.35■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms