Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Gm27322-201ENSMUST00000184007 104 ntBASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav7-4A0A075B6C1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-4A0A075B6C1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav7-4A0A075B6C1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-4A0A075B6C1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7-4A0A075B6C1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-4A0A075B6C1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7-4A0A075B6C1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav7-4A0A075B6C1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav7-4A0A075B6C1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-4A0A075B6C1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7-4A0A075B6C1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.7■□□□□ 0.42
Trav7-4A0A075B6C1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav7-4A0A075B6C1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-4A0A075B6C1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-4A0A075B6C1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav7-4A0A075B6C1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7-4A0A075B6C1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Peli2-204ENSMUST00000226513 1320 ntBASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7-4A0A075B6C1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.67■□□□□ 0.42
Trav7-4A0A075B6C1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-4A0A075B6C1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7-4A0A075B6C1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trav7-4A0A075B6C1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-4A0A075B6C1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav7-4A0A075B6C1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-4A0A075B6C1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav7-4A0A075B6C1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-4A0A075B6C1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav7-4A0A075B6C1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-4A0A075B6C1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav7-4A0A075B6C1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav7-4A0A075B6C1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav7-4A0A075B6C1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav7-4A0A075B6C1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7-4A0A075B6C1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-4A0A075B6C1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-4A0A075B6C1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7-4A0A075B6C1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav7-4A0A075B6C1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7-4A0A075B6C1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-4A0A075B6C1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-4A0A075B6C1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav7-4A0A075B6C1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav7-4A0A075B6C1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-4A0A075B6C1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-4A0A075B6C1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-4A0A075B6C1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7-4A0A075B6C1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7-4A0A075B6C1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav7-4A0A075B6C1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7-4A0A075B6C1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav7-4A0A075B6C1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7-4A0A075B6C1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav7-4A0A075B6C1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-4A0A075B6C1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-4A0A075B6C1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7-4A0A075B6C1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms