Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav14d-1A0A075B6B1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14d-1A0A075B6B1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14d-1A0A075B6B1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav14d-1A0A075B6B1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trav14d-1A0A075B6B1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav14d-1A0A075B6B1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav14d-1A0A075B6B1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav14d-1A0A075B6B1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav14d-1A0A075B6B1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav14d-1A0A075B6B1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav14d-1A0A075B6B1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14d-1A0A075B6B1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav14d-1A0A075B6B1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14d-1A0A075B6B1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14d-1A0A075B6B1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14d-1A0A075B6B1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14d-1A0A075B6B1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14d-1A0A075B6B1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14d-1A0A075B6B1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav14d-1A0A075B6B1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14d-1A0A075B6B1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Gm26115-201ENSMUST00000175605 87 ntBASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14d-1A0A075B6B1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14d-1A0A075B6B1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14d-1A0A075B6B1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav14d-1A0A075B6B1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14d-1A0A075B6B1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trav14d-1A0A075B6B1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14d-1A0A075B6B1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav14d-1A0A075B6B1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav14d-1A0A075B6B1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav14d-1A0A075B6B1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14d-1A0A075B6B1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav14d-1A0A075B6B1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Trav14d-1A0A075B6B1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav14d-1A0A075B6B1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav14d-1A0A075B6B1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14d-1A0A075B6B1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav14d-1A0A075B6B1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14d-1A0A075B6B1 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.15■□□□□ 0.34
Trav14d-1A0A075B6B1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav14d-1A0A075B6B1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14d-1A0A075B6B1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav14d-1A0A075B6B1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms