Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav16nA0A075B634 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16nA0A075B634 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.51■□□□□ 0.39
Trav16nA0A075B634 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav16nA0A075B634 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav16nA0A075B634 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16nA0A075B634 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16nA0A075B634 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav16nA0A075B634 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16nA0A075B634 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16nA0A075B634 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Trav16nA0A075B634 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16nA0A075B634 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav16nA0A075B634 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16nA0A075B634 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16nA0A075B634 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16nA0A075B634 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav16nA0A075B634 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16nA0A075B634 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16nA0A075B634 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16nA0A075B634 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16nA0A075B634 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16nA0A075B634 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16nA0A075B634 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16nA0A075B634 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16nA0A075B634 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav16nA0A075B634 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16nA0A075B634 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16nA0A075B634 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16nA0A075B634 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16nA0A075B634 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16nA0A075B634 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16nA0A075B634 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16nA0A075B634 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16nA0A075B634 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16nA0A075B634 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16nA0A075B634 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16nA0A075B634 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16nA0A075B634 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16nA0A075B634 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16nA0A075B634 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav16nA0A075B634 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav16nA0A075B634 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav16nA0A075B634 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav16nA0A075B634 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Trav16nA0A075B634 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16nA0A075B634 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16nA0A075B634 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav16nA0A075B634 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16nA0A075B634 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16nA0A075B634 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16nA0A075B634 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav16nA0A075B634 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16nA0A075B634 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16nA0A075B634 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav16nA0A075B634 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav16nA0A075B634 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16nA0A075B634 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16nA0A075B634 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16nA0A075B634 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16nA0A075B634 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav16nA0A075B634 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav16nA0A075B634 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav16nA0A075B634 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav16nA0A075B634 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav16nA0A075B634 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16nA0A075B634 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16nA0A075B634 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.33■□□□□ 0.36
Trav16nA0A075B634 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav16nA0A075B634 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trav16nA0A075B634 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav16nA0A075B634 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav16nA0A075B634 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Trav16nA0A075B634 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav16nA0A075B634 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav16nA0A075B634 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav16nA0A075B634 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav16nA0A075B634 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.31■□□□□ 0.36
Trav16nA0A075B634 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.31■□□□□ 0.36
Trav16nA0A075B634 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav16nA0A075B634 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav16nA0A075B634 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav16nA0A075B634 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav16nA0A075B634 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms