Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav7n-4A0A075B620 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav7n-4A0A075B620 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav7n-4A0A075B620 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-4A0A075B620 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav7n-4A0A075B620 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav7n-4A0A075B620 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-4A0A075B620 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trav7n-4A0A075B620 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-4A0A075B620 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav7n-4A0A075B620 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7n-4A0A075B620 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7n-4A0A075B620 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7n-4A0A075B620 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav7n-4A0A075B620 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav7n-4A0A075B620 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav7n-4A0A075B620 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav7n-4A0A075B620 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav7n-4A0A075B620 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav7n-4A0A075B620 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav7n-4A0A075B620 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trav7n-4A0A075B620 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-4A0A075B620 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-4A0A075B620 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav7n-4A0A075B620 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-4A0A075B620 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-4A0A075B620 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav7n-4A0A075B620 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav7n-4A0A075B620 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav7n-4A0A075B620 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trav7n-4A0A075B620 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7n-4A0A075B620 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7n-4A0A075B620 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav7n-4A0A075B620 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav7n-4A0A075B620 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7n-4A0A075B620 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7n-4A0A075B620 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7n-4A0A075B620 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav7n-4A0A075B620 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7n-4A0A075B620 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav7n-4A0A075B620 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7n-4A0A075B620 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trav7n-4A0A075B620 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav7n-4A0A075B620 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav7n-4A0A075B620 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav7n-4A0A075B620 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav7n-4A0A075B620 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav7n-4A0A075B620 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav7n-4A0A075B620 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav7n-4A0A075B620 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms