Protein–RNA interactions for Protein: A0A075B5V5

Ighv1-39, Immunoglobulin heavy variable 1-39 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-39A0A075B5V5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ighv1-39A0A075B5V5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-39A0A075B5V5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-39A0A075B5V5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Nkain2-201ENSMUST00000092602 558 ntBASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-39A0A075B5V5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-39A0A075B5V5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-39A0A075B5V5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-39A0A075B5V5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-39A0A075B5V5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ighv1-39A0A075B5V5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ighv1-39A0A075B5V5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-39A0A075B5V5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-39A0A075B5V5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ighv1-39A0A075B5V5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.25■□□□□ 0.51
Ighv1-39A0A075B5V5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.24■□□□□ 0.51
Ighv1-39A0A075B5V5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Gm30023-201ENSMUST00000197970 889 ntBASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-39A0A075B5V5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Ighv1-39A0A075B5V5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-39A0A075B5V5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ighv1-39A0A075B5V5 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.22■□□□□ 0.51
Ighv1-39A0A075B5V5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ighv1-39A0A075B5V5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Gm6821-201ENSMUST00000107540 542 ntBASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ighv1-39A0A075B5V5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ighv1-39A0A075B5V5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv1-39A0A075B5V5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.19■□□□□ 0.5
Ighv1-39A0A075B5V5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-39A0A075B5V5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-39A0A075B5V5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-39A0A075B5V5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-39A0A075B5V5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-39A0A075B5V5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ighv1-39A0A075B5V5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ighv1-39A0A075B5V5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-39A0A075B5V5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-39A0A075B5V5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-39A0A075B5V5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-39A0A075B5V5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-39A0A075B5V5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-39A0A075B5V5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.12■□□□□ 0.49
Ighv1-39A0A075B5V5 Gm8503-201ENSMUST00000118131 455 ntBASIC18.12■□□□□ 0.49
Ighv1-39A0A075B5V5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-39A0A075B5V5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-39A0A075B5V5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-39A0A075B5V5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.11■□□□□ 0.49
Ighv1-39A0A075B5V5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-39A0A075B5V5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-39A0A075B5V5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-39A0A075B5V5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-39A0A075B5V5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-39A0A075B5V5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-39A0A075B5V5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighv1-39A0A075B5V5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms