Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC093899.1-201ENST00000457984 376 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPS27P29-201ENST00000463110 252 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC097493.1-201ENST00000463958 372 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 SRRM1P2-201ENST00000464531 1192 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPS23P3-201ENST00000470993 430 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC017015.1-201ENST00000477387 286 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPL21P13-201ENST00000488305 481 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC109927.2-201ENST00000506416 303 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 MTND2P33-201ENST00000506452 1031 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 APOOP4-201ENST00000513530 597 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC037471.2-201ENST00000564941 598 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AL512347.1-201ENST00000566420 503 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AC090186.1-201ENST00000605991 572 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 Z99129.1-201ENST00000612510 255 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
DDX43Q9NXZ2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.84
DDX43Q9NXZ2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
DDX43Q9NXZ2 AC091152.2-201ENST00000591628 2569 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 Z83843.1-201ENST00000604070 3685 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AF117829.1-206ENST00000621883 3802 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 Y_RNA.18-201ENST00000362461 102 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RNU6-1215P-201ENST00000384441 102 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 Y_RNA.516-201ENST00000384541 124 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL031679.1-201ENST00000400616 525 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 USP9YP33-201ENST00000412220 421 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPS15AP38-201ENST00000413110 372 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPL21P32-201ENST00000419877 477 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPL23AP22-201ENST00000437556 453 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 SDCBPP1-201ENST00000440192 890 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL031667.1-201ENST00000440222 725 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPL36AP33-201ENST00000450395 310 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 BX510359.1-201ENST00000456973 237 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 RPL30P9-201ENST00000465586 330 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC116337.2-201ENST00000477662 156 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC005476.1-201ENST00000554427 397 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL022099.1-201ENST00000604551 712 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC004853.1-201ENST00000604902 698 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL357080.1-201ENST00000617394 239 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AL596245.1-201ENST00000618994 362 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC231657.1-201ENST00000624313 397 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC006927.3-201ENST00000638789 384 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 AC138915.3-201ENST00000562908 1389 ntBASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX43Q9NXZ2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 RNU6-882P-201ENST00000391025 103 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 AL136372.1-201ENST00000403060 228 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 MIR1284-201ENST00000408337 120 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 AC007899.1-201ENST00000412776 775 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 AC126124.2-201ENST00000413542 321 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 TPMTP2-201ENST00000414372 726 ntBASIC3.57□□□□□ -1.84
DDX43Q9NXZ2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms