Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AC103810.1-201ENST00000579873 453 ntBASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AP001180.3-201ENST00000582221 145 ntBASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AC004775.1-201ENST00000607389 753 ntBASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 AC138649.5-201ENST00000637456 137 ntBASIC2.38□□□□□ -2.03
SHANK3Q9BYB0 Y_RNA.205-201ENST00000364128 113 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 SNORA51.12-201ENST00000384448 134 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 RPL31P2-201ENST00000413849 377 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 MTND4LP16-201ENST00000440828 295 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 snoU13.7-201ENST00000459220 104 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC090071.1-201ENST00000507713 644 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC103833.1-201ENST00000517442 172 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC087441.2-201ENST00000529141 262 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AP001033.2-201ENST00000609701 1003 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 MTATP6P31-201ENST00000406985 692 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 MIR1250-201ENST00000408098 113 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 RNU2-21P-201ENST00000410368 188 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 MTND4LP7-201ENST00000431728 294 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 FABP5P3-201ENST00000437960 408 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AL513321.1-201ENST00000441175 761 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC079804.2-201ENST00000490376 200 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC011352.3-201ENST00000505162 593 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC095057.3-201ENST00000567102 1157 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC010735.1-201ENST00000567305 1026 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC098848.2-201ENST00000588023 330 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AL355802.4-201ENST00000607635 548 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 AC090425.2-201ENST00000608818 501 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.37□□□□□ -2.03
SHANK3Q9BYB0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC103988.1-201ENST00000566382 2177 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 SEC63P2-201ENST00000503863 1939 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 UBE2L2-201ENST00000254302 429 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 RNA5SP391-201ENST00000363456 119 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 BTBD10P2-201ENST00000404779 676 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 RPS15AP1-201ENST00000457423 391 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 RPL37P6-202ENST00000464216 403 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 RPL23AP55-201ENST00000498163 452 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC110792.2-201ENST00000510278 224 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC083923.1-201ENST00000523708 376 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 MIR3199-2-201ENST00000636243 86 ntBASIC2.36□□□□□ -2.03
SHANK3Q9BYB0 RNA5SP27-201ENST00000363839 119 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 TOMM22P1-201ENST00000418578 312 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 FNDC3CP-201ENST00000420795 1155 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC027124.2-201ENST00000428249 105 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 PIGFP3-201ENST00000441918 722 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC133963.2-201ENST00000513686 578 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AL035411.2-201ENST00000604022 421 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 KATNBL1P5-201ENST00000605015 517 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC073569.3-201ENST00000619055 682 ntBASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.35□□□□□ -2.03
SHANK3Q9BYB0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 Y_RNA.30-201ENST00000362572 97 ntBASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 MTND3P20-201ENST00000407663 186 ntBASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 AC007000.2-201ENST00000442564 487 ntBASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 AIG1P1-201ENST00000503376 148 ntBASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.34□□□□□ -2.03
SHANK3Q9BYB0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms