Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL606923.1-201ENST00000406616 190 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHB3P54753 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 RPL31P12-201ENST00000422587 358 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC009965.2-201ENST00000425328 970 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC096632.1-201ENST00000427395 310 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 TXNP1-201ENST00000441872 371 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 MRPS31P2-201ENST00000451581 518 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 MTATP8P1-201ENST00000467115 207 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC010655.3-201ENST00000478818 450 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 NIP7P2-201ENST00000485801 544 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC055855.1-201ENST00000489563 579 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHB3P54753 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 RPL39P5-202ENST00000512505 151 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 RFPL4AP5-201ENST00000514977 504 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 HMGB1P19-201ENST00000517578 577 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.81□□□□□ -1.64
EPHB3P54753 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHB3P54753 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
EPHB3P54753 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHB3P54753 AP000857.1-201ENST00000532151 543 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.81□□□□□ -1.64
EPHB3P54753 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 BNIP3P25-201ENST00000596023 559 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AC005014.2-201ENST00000607795 599 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AL355816.1-201ENST00000607951 118 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EPHB3P54753 AL391684.1-202ENST00000641293 1636 ntBASIC4.81□□□□□ -1.64
EPHB3P54753 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHB3P54753 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
EPHB3P54753 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EPHB3P54753 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EPHB3P54753 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
EPHB3P54753 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB3P54753 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB3P54753 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB3P54753 Y_RNA.167-201ENST00000363735 109 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 Y_RNA.557-201ENST00000384680 107 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 MIR649-201ENST00000384843 97 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC016769.3-201ENST00000396562 315 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 MRPL42P3-201ENST00000401492 326 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 PRRC2CP1-201ENST00000404428 159 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 RNU2-47P-201ENST00000410649 186 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 HMGB3P2-201ENST00000411913 584 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC012065.2-201ENST00000421295 375 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC234779.1-201ENST00000425910 285 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 RSL24D1P6-201ENST00000426934 401 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB3P54753 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB3P54753 FABP5P14-201ENST00000437273 393 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AF228730.2-201ENST00000438784 848 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 HMGB3P11-201ENST00000440127 604 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB3P54753 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB3P54753 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC104308.1-201ENST00000454621 333 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 PPIAP21-201ENST00000464473 501 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AL049714.1-201ENST00000466686 347 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC109327.1-201ENST00000471666 403 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC106872.2-201ENST00000494303 480 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 RNU6-764P-201ENST00000516396 105 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AP003497.1-201ENST00000528472 562 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 ATP5J2P6-201ENST00000565203 266 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC023575.1-201ENST00000580510 358 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 MIR5690-201ENST00000583739 73 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.8□□□□□ -1.64
EPHB3P54753 AL121992.2-201ENST00000606262 256 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC022893.3-201ENST00000607665 437 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 OR6R2P-201ENST00000609216 300 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC011944.2-201ENST00000624440 683 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 AC090337.1-201ENST00000579651 2074 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHB3P54753 AC100778.3-201ENST00000580060 1750 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 PCAT14-202ENST00000627127 3935 ntBASIC4.8□□□□□ -1.64
EPHB3P54753 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHB3P54753 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHB3P54753 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB3P54753 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 AL450326.2-201ENST00000421913 1962 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms