Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Mir6404-201ENSMUST00000183699 94 ntBASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Gm43072-201ENSMUST00000200283 1671 ntBASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Uspl1Q3ULM6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Uspl1Q3ULM6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Gm17807-201ENSMUST00000186869 298 ntBASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uspl1Q3ULM6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uspl1Q3ULM6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uspl1Q3ULM6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Uspl1Q3ULM6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Uspl1Q3ULM6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Uspl1Q3ULM6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms