Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.17■□□□□ 0.02
Ctla4P09793 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.17■□□□□ 0.02
Ctla4P09793 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.17■□□□□ 0.02
Ctla4P09793 Gm18669-201ENSMUST00000216049 778 ntBASIC15.17■□□□□ 0.02
Ctla4P09793 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ctla4P09793 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.16■□□□□ 0.02
Ctla4P09793 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ctla4P09793 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Ctla4P09793 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.16■□□□□ 0.02
Ctla4P09793 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ctla4P09793 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.16■□□□□ 0.02
Ctla4P09793 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.16■□□□□ 0.02
Ctla4P09793 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ctla4P09793 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.16■□□□□ 0.02
Ctla4P09793 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ctla4P09793 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ctla4P09793 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ctla4P09793 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.15■□□□□ 0.02
Ctla4P09793 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.15■□□□□ 0.02
Ctla4P09793 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ctla4P09793 Gm27357-201ENSMUST00000183754 135 ntBASIC15.15■□□□□ 0.02
Ctla4P09793 Gm28033-201ENSMUST00000184224 96 ntBASIC15.15■□□□□ 0.02
Ctla4P09793 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ctla4P09793 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ctla4P09793 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Gm44430-201ENSMUST00000203376 995 ntBASIC15.14■□□□□ 0.01
Ctla4P09793 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ctla4P09793 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.14■□□□□ 0.01
Ctla4P09793 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctla4P09793 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.13■□□□□ 0.01
Ctla4P09793 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.13■□□□□ 0.01
Ctla4P09793 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ctla4P09793 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ctla4P09793 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ctla4P09793 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.13■□□□□ 0.01
Ctla4P09793 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctla4P09793 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms