Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SNORA50A-202ENST00000629536 136 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC011155.1-201ENST00000316512 456 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 RNU6-661P-201ENST00000362409 107 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 U8.10-201ENST00000384260 133 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 DHFRP5-201ENST00000406944 564 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AP1B1P2-201ENST00000416196 106 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 RPS15AP12-201ENST00000419498 388 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC023512.1-201ENST00000444513 499 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 VN1R84P-201ENST00000593697 235 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 AC135803.1-201ENST00000608748 565 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.78□□□□□ -1.96
SHANK3Q9BYB0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 SNORD114-26-201ENST00000363543 72 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 POLR2J4-204ENST00000418424 324 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AL118520.1-201ENST00000450770 291 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AC067904.2-201ENST00000517322 1283 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AL355816.1-201ENST00000607951 118 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AL359198.2-201ENST00000611836 194 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 AC131280.1-202ENST00000624067 4211 ntBASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SHANK3Q9BYB0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RNU4-62P-201ENST00000410125 130 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC003989.2-201ENST00000440224 169 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 SNORD116-26-201ENST00000516006 96 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 OR4R2P-201ENST00000530815 597 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC108479.2-201ENST00000617314 601 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RNU6-666P-201ENST00000363499 107 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RNU1-51P-201ENST00000365345 176 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 MIR7-1-201ENST00000384871 110 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AP000275.1-201ENST00000411943 390 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RPL12P25-201ENST00000455592 494 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 OR52A4P-203ENST00000498233 1014 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 RPL38P4-201ENST00000502376 214 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC009268.1-201ENST00000561352 1203 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC006116.7-201ENST00000590141 756 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC022387.2-201ENST00000604050 448 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC002064.3-201ENST00000623448 346 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 CYP3A51P-201ENST00000633513 256 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 AC084035.1-201ENST00000634543 607 ntBASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SHANK3Q9BYB0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC007256.1-201ENST00000392253 2765 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 RNU6-707P-201ENST00000364647 95 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC009965.2-201ENST00000425328 970 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC140059.1-201ENST00000489238 361 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC022790.1-201ENST00000522872 204 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 SMARCE1P4-201ENST00000523647 241 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AP001542.2-201ENST00000593141 364 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AL589994.2-201ENST00000621124 579 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 LINC00216-201ENST00000623548 1126 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC096656.1-201ENST00000623826 1364 ntBASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SHANK3Q9BYB0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 AC092447.7-201ENST00000422212 1621 ntBASIC2.74□□□□□ -1.97
SHANK3Q9BYB0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms