Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SOD1P00441 AC009159.1-201ENST00000618386 642 ntBASIC2.33□□□□□ -2.04
SOD1P00441 AL162233.1-201ENST00000620014 944 ntBASIC2.33□□□□□ -2.04
SOD1P00441 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SOD1P00441 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SOD1P00441 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.33□□□□□ -2.04
SOD1P00441 MTND5P11-201ENST00000511037 1812 ntBASIC2.33□□□□□ -2.04
SOD1P00441 MTCO1P18-201ENST00000455518 1419 ntBASIC2.33□□□□□ -2.04
SOD1P00441 AC103988.1-201ENST00000566382 2177 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MAPK10-266ENST00000641066 6555 ntBASIC2.32□□□□□ -2.04
SOD1P00441 VTRNA1-1-201ENST00000363120 99 ntBASIC2.32□□□□□ -2.04
SOD1P00441 RNU6-1339P-201ENST00000363574 91 ntBASIC2.32□□□□□ -2.04
SOD1P00441 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.32□□□□□ -2.04
SOD1P00441 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.32□□□□□ -2.04
SOD1P00441 RNU6-629P-201ENST00000384061 103 ntBASIC2.32□□□□□ -2.04
SOD1P00441 RNU6-1151P-201ENST00000384684 107 ntBASIC2.32□□□□□ -2.04
SOD1P00441 SNORA3.2-201ENST00000408221 125 ntBASIC2.32□□□□□ -2.04
SOD1P00441 RPL36P19-201ENST00000430744 301 ntBASIC2.32□□□□□ -2.04
SOD1P00441 UBE2V1P5-201ENST00000440070 405 ntBASIC2.32□□□□□ -2.04
SOD1P00441 AC007000.2-201ENST00000442564 487 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MTND1P33-201ENST00000446251 917 ntBASIC2.32□□□□□ -2.04
SOD1P00441 HIGD1AP2-201ENST00000446367 280 ntBASIC2.32□□□□□ -2.04
SOD1P00441 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MTCO3P35-201ENST00000485582 781 ntBASIC2.32□□□□□ -2.04
SOD1P00441 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.32□□□□□ -2.04
SOD1P00441 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
SOD1P00441 RNU6-488P-201ENST00000515918 99 ntBASIC2.32□□□□□ -2.04
SOD1P00441 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.32□□□□□ -2.04
SOD1P00441 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.32□□□□□ -2.04
SOD1P00441 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.32□□□□□ -2.04
SOD1P00441 AP005205.1-201ENST00000563503 508 ntBASIC2.32□□□□□ -2.04
SOD1P00441 AC012182.1-201ENST00000570133 895 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MIR4504-201ENST00000577413 92 ntBASIC2.32□□□□□ -2.04
SOD1P00441 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MIR4435-1-201ENST00000582552 80 ntBASIC2.32□□□□□ -2.04
SOD1P00441 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
SOD1P00441 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.32□□□□□ -2.04
SOD1P00441 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
SOD1P00441 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.32□□□□□ -2.04
SOD1P00441 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.32□□□□□ -2.04
SOD1P00441 AL109659.3-201ENST00000624985 950 ntBASIC2.32□□□□□ -2.04
SOD1P00441 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.32□□□□□ -2.04
SOD1P00441 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
SOD1P00441 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SOD1P00441 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SOD1P00441 AC073055.1-201ENST00000456901 1621 ntBASIC2.31□□□□□ -2.04
SOD1P00441 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
SOD1P00441 FRG1BP-201ENST00000278882 761 ntBASIC2.31□□□□□ -2.04
SOD1P00441 RNU6-50P-201ENST00000362356 103 ntBASIC2.31□□□□□ -2.04
SOD1P00441 U8.8-201ENST00000365399 135 ntBASIC2.31□□□□□ -2.04
SOD1P00441 RNU6-1181P-201ENST00000384191 106 ntBASIC2.31□□□□□ -2.04
SOD1P00441 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SOD1P00441 ATP5F1P6-201ENST00000402768 767 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AC073264.1-201ENST00000411508 416 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.31□□□□□ -2.04
SOD1P00441 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.31□□□□□ -2.04
SOD1P00441 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.31□□□□□ -2.04
SOD1P00441 MTND3P4-201ENST00000453537 303 ntBASIC2.31□□□□□ -2.04
SOD1P00441 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.31□□□□□ -2.04
SOD1P00441 LINC00888-204ENST00000487386 421 ntBASIC2.31□□□□□ -2.04
SOD1P00441 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.31□□□□□ -2.04
SOD1P00441 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.31□□□□□ -2.04
SOD1P00441 AC104057.1-201ENST00000515547 497 ntBASIC2.31□□□□□ -2.04
SOD1P00441 RNA5SP281-201ENST00000516504 135 ntBASIC2.31□□□□□ -2.04
SOD1P00441 IGKV2D-36-201ENST00000518643 226 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AP004371.1-201ENST00000525240 214 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.31□□□□□ -2.04
SOD1P00441 AC109635.4-202ENST00000531666 412 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SOD1P00441 AC107954.1-201ENST00000565906 727 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AL590282.1-201ENST00000610379 1136 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AC068831.7-201ENST00000616954 363 ntBASIC2.31□□□□□ -2.04
SOD1P00441 AL121594.5-201ENST00000631724 573 ntBASIC2.31□□□□□ -2.04
SOD1P00441 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
SOD1P00441 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SOD1P00441 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.3□□□□□ -2.04
SOD1P00441 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SOD1P00441 RNA5SP27-201ENST00000363839 119 ntBASIC2.3□□□□□ -2.04
SOD1P00441 SNORD114-30-201ENST00000364448 72 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RNU6-883P-201ENST00000384597 107 ntBASIC2.3□□□□□ -2.04
SOD1P00441 AL591416.1-201ENST00000404015 867 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RNA5SP56-201ENST00000410277 118 ntBASIC2.3□□□□□ -2.04
SOD1P00441 UBE2V1P11-201ENST00000411559 285 ntBASIC2.3□□□□□ -2.04
SOD1P00441 TATDN1P1-201ENST00000414123 891 ntBASIC2.3□□□□□ -2.04
SOD1P00441 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.3□□□□□ -2.04
SOD1P00441 ATG3P1-201ENST00000419507 911 ntBASIC2.3□□□□□ -2.04
SOD1P00441 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.3□□□□□ -2.04
SOD1P00441 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.3□□□□□ -2.04
SOD1P00441 RAB11AP1-201ENST00000442978 646 ntBASIC2.3□□□□□ -2.04
SOD1P00441 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.3□□□□□ -2.04
SOD1P00441 HMGB1P15-201ENST00000453854 435 ntBASIC2.3□□□□□ -2.04
SOD1P00441 AL109741.2-201ENST00000455561 343 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RN7SL429P-201ENST00000479090 223 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RN7SL489P-201ENST00000486185 223 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RPS27P23-201ENST00000487608 251 ntBASIC2.3□□□□□ -2.04
SOD1P00441 RN7SL327P-201ENST00000488659 223 ntBASIC2.3□□□□□ -2.04
SOD1P00441 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.3□□□□□ -2.04
SOD1P00441 AL024509.2-201ENST00000493462 493 ntBASIC2.3□□□□□ -2.04
SOD1P00441 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms