Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB9Q9Y5E1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC109446.4-201ENST00000623235 2755 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AL359955.1-201ENST00000455242 3275 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-770P-201ENST00000363929 105 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SKP124-201ENST00000364730 341 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-200P-201ENST00000364743 107 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-806P-201ENST00000365147 105 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RNU6-33P-201ENST00000384793 107 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 DPPA2P2-201ENST00000418220 897 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC004866.2-201ENST00000438285 481 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA40.15-201ENST00000516884 107 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RN7SKP258-201ENST00000517151 304 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 SNORA43.3-201ENST00000517240 103 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC087369.1-201ENST00000520775 996 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 CBX3P8-201ENST00000532412 525 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 MIR5692A1-201ENST00000580523 69 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 VN1R91P-201ENST00000594377 169 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC006115.2-201ENST00000596823 202 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AC012603.1-201ENST00000606424 528 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 AL450472.3-201ENST00000615578 367 ntBASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB9Q9Y5E1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PCDHB9Q9Y5E1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB9Q9Y5E1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.84□□□□□ -1.48
PCDHB9Q9Y5E1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 IRF5P1-201ENST00000504852 2164 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 MTND5P6-201ENST00000422338 1798 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AL121886.1-201ENST00000358609 435 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RNU1-35P-201ENST00000362782 153 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SKP115-201ENST00000363177 317 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-288P-201ENST00000363690 104 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AL030996.1-201ENST00000411430 235 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RPL21P90-201ENST00000415692 466 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RPS26P47-201ENST00000427219 348 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC008065.1-201ENST00000428525 348 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC016712.1-201ENST00000431088 378 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 CFL1P1-202ENST00000432948 411 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC090774.1-201ENST00000435925 246 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RPL7L1P1-201ENST00000448259 785 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 IGHV5-78-201ENST00000450948 295 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 Z92846.1-201ENST00000456203 268 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC069499.1-201ENST00000489433 509 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RN7SKP67-201ENST00000515905 235 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RNU6-138P-201ENST00000515952 107 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 RRN3P3-201ENST00000549207 578 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 MIR15A-201ENST00000607334 83 ntBASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHB9Q9Y5E1 MFSD8-239ENST00000641590 2479 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms