Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RMST_2.1-201ENST00000617263 136 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 C2orf27A-204ENST00000623058 969 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 RNU6-891P-201ENST00000384280 111 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 MIR142-201ENST00000384835 87 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 GSTA11P-201ENST00000452866 669 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 RNU6-1218P-201ENST00000458990 108 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AL163540.1-201ENST00000485382 386 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 PCNAP1-201ENST00000505363 709 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 RN7SKP234-201ENST00000517173 224 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 MTCO3P13-201ENST00000577757 781 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 MTCO2P22-201ENST00000603246 681 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 BNIP3P7-201ENST00000605641 516 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC245517.5-201ENST00000611529 162 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 AC011472.4-201ENST00000615848 491 ntBASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHANK3Q9BYB0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 RNU4-31P-201ENST00000384211 141 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 MIR613-201ENST00000385248 95 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AL354719.1-201ENST00000406535 843 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 MIR1276-201ENST00000408707 83 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AL355994.1-201ENST00000424379 260 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 RNU7-27P-201ENST00000459281 62 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 OR4V1P-201ENST00000525394 1140 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 OR4T1P-201ENST00000554933 911 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AC012531.5-201ENST00000611375 151 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 AC093591.3-201ENST00000634516 308 ntBASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SHANK3Q9BYB0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 SNORA67.3-201ENST00000384366 140 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 OR4K11P-201ENST00000431829 904 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 MUPP-201ENST00000438111 566 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 MTCYBP31-201ENST00000438855 1122 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 XKRYP6-201ENST00000440468 1116 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 XKRYP3-201ENST00000442113 1116 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 AL627224.1-201ENST00000448334 444 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 AL451074.6-201ENST00000608512 729 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 CU459211.1-201ENST00000635667 749 ntBASIC2.8□□□□□ -1.96
SHANK3Q9BYB0 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 U8.8-201ENST00000365399 135 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 Y_RNA.374-201ENST00000365606 101 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 MIR92A2-201ENST00000385299 75 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 RPL26P37-201ENST00000411983 438 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC021146.7-201ENST00000509604 775 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 IGHV3-76-201ENST00000522465 295 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC005951.1-201ENST00000576706 485 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AP001148.1-201ENST00000624124 2359 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AL118496.1-201ENST00000440201 1812 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 RNU1-138P-201ENST00000384093 164 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 SNORA11.4-201ENST00000408823 129 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AL157827.1-201ENST00000447622 132 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 TRBV26-201ENST00000456572 344 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC010627.1-201ENST00000503819 1294 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 NAMPTP2-201ENST00000505629 1115 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC025881.1-201ENST00000518851 512 ntBASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.79□□□□□ -1.96
SHANK3Q9BYB0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms