Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 IGKV2-36-201ENST00000519999 223 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AL391156.1-201ENST00000554965 554 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC103810.6-201ENST00000606708 136 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 MORF4L1P6-201ENST00000418771 268 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AL162388.1-201ENST00000450912 352 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC239798.3-201ENST00000454459 408 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 MTCYBP14-201ENST00000457471 715 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 HMGB1P25-201ENST00000468402 607 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC008716.1-201ENST00000511084 513 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 MIR6715B-201ENST00000637172 77 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 MAPK10-322ENST00000641485 4530 ntBASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHANK3Q9BYB0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.4□□□□□ -1.86
SHANK3Q9BYB0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHANK3Q9BYB0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHANK3Q9BYB0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.4□□□□□ -1.86
SHANK3Q9BYB0 RNU6-14P-201ENST00000384630 106 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 RNU4-53P-201ENST00000410828 140 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 HMGB3P23-201ENST00000414981 585 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 AC016687.1-201ENST00000482574 353 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 AC108729.3-201ENST00000513484 108 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 RN7SKP82-201ENST00000516786 223 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 AL109741.3-201ENST00000561748 592 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 ISCA1P3-201ENST00000577104 373 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 AC090115.4-201ENST00000609970 188 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 MIR8070-201ENST00000616510 88 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 CUL4AP1-201ENST00000514750 1863 ntBASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.4□□□□□ -1.87
SHANK3Q9BYB0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 RN7SKP44-201ENST00000363602 316 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL589994.1-201ENST00000404962 340 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL353743.4-201ENST00000422653 1547 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL353705.4-201ENST00000449661 238 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 RPL23AP70-201ENST00000483361 460 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AP003102.1-201ENST00000525638 661 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC092608.2-201ENST00000624427 218 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC092881.1-201ENST00000638218 2733 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC026523.2-201ENST00000625039 7739 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC007342.7-201ENST00000624610 2337 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL606537.1-201ENST00000607258 2011 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 MIR27B-201ENST00000385129 97 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC234781.4-201ENST00000419384 244 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC118282.1-201ENST00000506408 765 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC119751.1-201ENST00000513357 765 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 AC009950.2-201ENST00000636548 183 ntBASIC3.39□□□□□ -1.87
SHANK3Q9BYB0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 LINC01355-201ENST00000566551 5444 ntBASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 AC006020.1-201ENST00000420179 1854 ntBASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 AP000526.1-201ENST00000603308 1388 ntBASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 MIR365B-201ENST00000362317 111 ntBASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 Y_RNA.540-201ENST00000384638 111 ntBASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
SHANK3Q9BYB0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms