Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uspl1Q3ULM6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Ank2-226ENSMUST00000189368 339 ntBASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uspl1Q3ULM6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Mir3081-201ENSMUST00000175305 84 ntBASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uspl1Q3ULM6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uspl1Q3ULM6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uspl1Q3ULM6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Gm21362-201ENSMUST00000194272 928 ntBASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Uspl1Q3ULM6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms