Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.75■□□□□ 0.27
Thumpd3P97770 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Thumpd3P97770 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Thumpd3P97770 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Gm10517-202ENSMUST00000192970 758 ntBASIC16.74■□□□□ 0.27
Thumpd3P97770 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Thumpd3P97770 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.74■□□□□ 0.27
Thumpd3P97770 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Thumpd3P97770 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.73■□□□□ 0.27
Thumpd3P97770 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Thumpd3P97770 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Thumpd3P97770 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.73■□□□□ 0.27
Thumpd3P97770 Gm12085-201ENSMUST00000119263 940 ntBASIC16.73■□□□□ 0.27
Thumpd3P97770 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.73■□□□□ 0.27
Thumpd3P97770 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Thumpd3P97770 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.72■□□□□ 0.27
Thumpd3P97770 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Gm7889-201ENSMUST00000185591 958 ntBASIC16.72■□□□□ 0.27
Thumpd3P97770 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Thumpd3P97770 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Thumpd3P97770 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Thumpd3P97770 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Thumpd3P97770 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Thumpd3P97770 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Thumpd3P97770 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms