Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
Hoxb3P09026 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.23■□□□□ 0.19
Hoxb3P09026 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxb3P09026 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxb3P09026 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxb3P09026 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.22■□□□□ 0.19
Hoxb3P09026 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.22■□□□□ 0.19
Hoxb3P09026 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hoxb3P09026 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.22■□□□□ 0.19
Hoxb3P09026 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hoxb3P09026 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxb3P09026 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm9727-201ENSMUST00000161387 555 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44357-201ENSMUST00000195897 142 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm19658-201ENSMUST00000196231 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44367-201ENSMUST00000196836 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44350-201ENSMUST00000197197 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44390-201ENSMUST00000197533 144 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44313-201ENSMUST00000198018 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44486-201ENSMUST00000198508 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44454-201ENSMUST00000198541 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44314-201ENSMUST00000199263 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44394-201ENSMUST00000199558 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44484-201ENSMUST00000199873 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44466-201ENSMUST00000200264 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm44359-201ENSMUST00000200671 138 ntBASIC16.21■□□□□ 0.19
Hoxb3P09026 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxb3P09026 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxb3P09026 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb3P09026 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb3P09026 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hoxb3P09026 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Hoxb3P09026 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Hoxb3P09026 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb3P09026 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb3P09026 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.2■□□□□ 0.18
Hoxb3P09026 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.2■□□□□ 0.18
Hoxb3P09026 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.2■□□□□ 0.18
Hoxb3P09026 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.2■□□□□ 0.18
Hoxb3P09026 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hoxb3P09026 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb3P09026 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.19■□□□□ 0.18
Hoxb3P09026 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb3P09026 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb3P09026 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb3P09026 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxb3P09026 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.19■□□□□ 0.18
Hoxb3P09026 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.19■□□□□ 0.18
Hoxb3P09026 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms