Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL161722.2-201ENST00000434731 981 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 FTH1P16-201ENST00000435241 552 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 NDUFB4P8-201ENST00000435351 367 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 RABEPKP1-201ENST00000440529 1026 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 RPL38P1-201ENST00000460914 211 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 RPL7L1P13-201ENST00000511702 739 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC022360.1-201ENST00000521058 340 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 AL359212.1-201ENST00000556608 614 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AL157394.1-201ENST00000562983 1224 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC011840.5-201ENST00000582125 771 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.5□□□□□ -1.53
EPHB3P54753 AL365204.3-201ENST00000612448 685 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC005332.6-201ENST00000613178 446 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 YWHAEP7-203ENST00000622054 312 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC005618.4-201ENST00000625053 554 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 AC093591.3-201ENST00000634516 308 ntBASIC5.5□□□□□ -1.53
EPHB3P54753 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.5□□□□□ -1.53
EPHB3P54753 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
EPHB3P54753 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.5□□□□□ -1.53
EPHB3P54753 AC004656.1-201ENST00000568479 4951 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.49□□□□□ -1.53
EPHB3P54753 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.49□□□□□ -1.53
EPHB3P54753 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
EPHB3P54753 AC125336.1-201ENST00000508893 2827 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
EPHB3P54753 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 Y_RNA.72-201ENST00000362894 103 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 RNU4-7P-201ENST00000364758 141 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 RNU6-483P-201ENST00000384088 108 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 RPS24P12-201ENST00000402084 394 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 RPL23AP47-201ENST00000408017 460 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 SNORA11C-201ENST00000408532 129 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 HMGB3P20-201ENST00000417997 600 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 DDX39BP1-205ENST00000422507 192 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 REREP1Y-201ENST00000422655 198 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 EI24P4-201ENST00000423683 1078 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 BX890604.2-201ENST00000427883 474 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.49□□□□□ -1.53
EPHB3P54753 AC006466.1-201ENST00000438721 289 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 REREP2Y-201ENST00000439103 200 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 USP9YP15-201ENST00000442391 422 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 SNRPGP6-201ENST00000451124 220 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 snoU13.20-201ENST00000459180 104 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC112206.1-201ENST00000468416 477 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.49□□□□□ -1.53
EPHB3P54753 KCTD9P5-201ENST00000504141 1170 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 AC002456.2-201ENST00000509356 380 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC022878.1-201ENST00000530684 149 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
EPHB3P54753 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 AL512360.1-201ENST00000555346 234 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 PSMA3P-201ENST00000555485 635 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.49□□□□□ -1.53
EPHB3P54753 AC087283.1-201ENST00000604029 1074 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC013553.2-201ENST00000604244 589 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC112191.3-201ENST00000604371 277 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AL162431.4-201ENST00000604674 411 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC069304.2-201ENST00000605154 435 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC091905.4-201ENST00000623432 202 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.49□□□□□ -1.53
EPHB3P54753 MKKS-204ENST00000639674 192 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 ZNF37BP-203ENST00000452306 1352 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 AC006206.1-201ENST00000544842 3387 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 AL355834.1-201ENST00000556602 3965 ntBASIC5.49□□□□□ -1.53
EPHB3P54753 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
EPHB3P54753 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHB3P54753 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms