Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.82■□□□□ 0.76
Mre11Q61216 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Mre11Q61216 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.82■□□□□ 0.76
Mre11Q61216 Gm5874-201ENSMUST00000096101 508 ntBASIC19.82■□□□□ 0.76
Mre11Q61216 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.82■□□□□ 0.76
Mre11Q61216 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Mre11Q61216 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.81■□□□□ 0.76
Mre11Q61216 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.81■□□□□ 0.76
Mre11Q61216 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Mre11Q61216 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Mre11Q61216 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.8■□□□□ 0.76
Mre11Q61216 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Mre11Q61216 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Mre11Q61216 Mir6349-201ENSMUST00000184059 97 ntBASIC19.8■□□□□ 0.76
Mre11Q61216 Gm8495-201ENSMUST00000188740 694 ntBASIC19.8■□□□□ 0.76
Mre11Q61216 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Gm10493-201ENSMUST00000097270 612 ntBASIC19.8■□□□□ 0.76
Mre11Q61216 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Mre11Q61216 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Mre11Q61216 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Mre11Q61216 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Mre11Q61216 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.79■□□□□ 0.76
Mre11Q61216 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Mre11Q61216 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.78■□□□□ 0.76
Mre11Q61216 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Mre11Q61216 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.78■□□□□ 0.76
Mre11Q61216 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.78■□□□□ 0.76
Mre11Q61216 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Mre11Q61216 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mre11Q61216 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Mre11Q61216 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Mre11Q61216 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Mre11Q61216 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Mre11Q61216 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.77■□□□□ 0.76
Mre11Q61216 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.77■□□□□ 0.76
Mre11Q61216 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.77■□□□□ 0.76
Mre11Q61216 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Mre11Q61216 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms