Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim43aQ3TL54 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Gm43183-201ENSMUST00000200632 547 ntBASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43aQ3TL54 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43aQ3TL54 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Gm10252-201ENSMUST00000209541 832 ntBASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43aQ3TL54 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Gm9731-201ENSMUST00000209480 747 ntBASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43aQ3TL54 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43aQ3TL54 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43aQ3TL54 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms