Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.83■□□□□ 0.28
Thumpd3P97770 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Thumpd3P97770 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Thumpd3P97770 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Odf3b-204ENSMUST00000227834 930 ntBASIC16.82■□□□□ 0.28
Thumpd3P97770 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Thumpd3P97770 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Thumpd3P97770 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Dancr-204ENSMUST00000132389 2347 ntBASIC16.81■□□□□ 0.28
Thumpd3P97770 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Thumpd3P97770 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.81■□□□□ 0.28
Thumpd3P97770 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Thumpd3P97770 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Thumpd3P97770 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Thumpd3P97770 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.8■□□□□ 0.28
Thumpd3P97770 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.8■□□□□ 0.28
Thumpd3P97770 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.8■□□□□ 0.28
Thumpd3P97770 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Thumpd3P97770 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.8■□□□□ 0.28
Thumpd3P97770 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Thumpd3P97770 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Thumpd3P97770 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms