Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.56□□□□□ -1.52
EPHB3P54753 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 RN7SKP147-201ENST00000517154 244 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 MTND1P35-201ENST00000526739 508 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.56□□□□□ -1.52
EPHB3P54753 AC087477.6-201ENST00000559595 843 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 KPNA2P3-201ENST00000584190 848 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 BNIP3P8-201ENST00000597863 560 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC073091.2-201ENST00000603205 907 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 LLPHP1-201ENST00000603571 367 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AC007363.1-201ENST00000604736 620 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 AL139124.1-201ENST00000609123 421 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 Mico1.1-201ENST00000611698 204 ntBASIC5.56□□□□□ -1.52
EPHB3P54753 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.56□□□□□ -1.52
EPHB3P54753 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
EPHB3P54753 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EPHB3P54753 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 DCAF13P1-201ENST00000495256 1330 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
EPHB3P54753 RNU6-1339P-201ENST00000363574 91 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 MIR16-1-201ENST00000385271 89 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AL034403.1-201ENST00000399414 885 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.55□□□□□ -1.52
EPHB3P54753 Y_RNA.598-201ENST00000410480 95 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 RNU4-55P-201ENST00000410731 137 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
EPHB3P54753 RPS3AP9-201ENST00000417027 792 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 RPS27AP14-201ENST00000422868 454 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 MTND2P23-201ENST00000422990 651 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AL356583.2-201ENST00000426536 280 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 HSPE1P16-201ENST00000426640 348 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 Z93242.1-201ENST00000427102 353 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 VDAC1P6-201ENST00000430062 855 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 PSMD10P3-201ENST00000437000 448 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 MTCYBP6-201ENST00000441810 138 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC087312.1-201ENST00000471411 480 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC012123.2-201ENST00000485809 248 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 HMGN2P25-201ENST00000486956 268 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 COX6B1P2-201ENST00000489624 230 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 MTCYBP43-201ENST00000513621 740 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 SNORA18.6-201ENST00000516792 115 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC239860.2-201ENST00000525886 270 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 OR4A45P-201ENST00000529954 901 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 OR5D15P-201ENST00000531671 942 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 AL596327.1-201ENST00000603629 213 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AL049539.1-201ENST00000611964 459 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC015712.7-201ENST00000615211 635 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 AC079228.1-201ENST00000624774 1049 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 U6.107-201ENST00000637108 79 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 AC135068.12-201ENST00000637370 931 ntBASIC5.55□□□□□ -1.52
EPHB3P54753 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
EPHB3P54753 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
EPHB3P54753 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
EPHB3P54753 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EPHB3P54753 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
EPHB3P54753 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
EPHB3P54753 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
EPHB3P54753 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EPHB3P54753 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EPHB3P54753 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 454.5 ms