Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AC003685.2-201ENST00000422795 395 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AL513175.1-201ENST00000431492 780 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AL353705.1-201ENST00000433468 480 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 OR5AP1P-201ENST00000529730 940 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 RNVU1-4-201ENST00000612985 164 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 SNORD39.4-201ENST00000620099 78 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AC093698.1-201ENST00000423843 571 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 RPS26P15-201ENST00000488067 348 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AL035404.1-201ENST00000497982 568 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AC020914.4-201ENST00000597690 277 ntBASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHANK3Q9BYB0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 Z99755.1-201ENST00000414048 380 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 RPL23AP82-202ENST00000427528 469 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 HMGB1P18-201ENST00000438801 619 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 RNA5SP356-201ENST00000515972 94 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 MIR4524B-201ENST00000581569 115 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 AC083843.2-201ENST00000568248 6253 ntBASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SHANK3Q9BYB0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 BX842559.1-201ENST00000419615 532 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 RPSAP41-201ENST00000439695 860 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 RNA5SP154-201ENST00000516193 111 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AL390838.2-201ENST00000602394 274 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 MIR7111-201ENST00000619751 72 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AF117829.1-206ENST00000621883 3802 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 HSPA8P19-201ENST00000505359 1517 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 Z83843.1-201ENST00000604070 3685 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC138393.1-206ENST00000540997 1886 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 RPL31P50-201ENST00000471002 296 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AL121603.1-201ENST00000553815 142 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC067852.4-201ENST00000590314 478 ntBASIC4.41□□□□□ -1.7
SHANK3Q9BYB0 AC100793.4-201ENST00000613683 429 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms