Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn5Q9JL35 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Gm4968-201ENSMUST00000071458 858 ntBASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn5Q9JL35 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn5Q9JL35 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Hmgn5Q9JL35 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn5Q9JL35 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn5Q9JL35 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms