Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.29■□□□□ 0.36
Znf235Q61116 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Znf235Q61116 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Znf235Q61116 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Znf235Q61116 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.29■□□□□ 0.36
Znf235Q61116 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.29■□□□□ 0.36
Znf235Q61116 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.28■□□□□ 0.36
Znf235Q61116 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Znf235Q61116 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.28■□□□□ 0.36
Znf235Q61116 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.28■□□□□ 0.36
Znf235Q61116 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.28■□□□□ 0.36
Znf235Q61116 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Znf235Q61116 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Znf235Q61116 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Znf235Q61116 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Znf235Q61116 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Znf235Q61116 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Znf235Q61116 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Znf235Q61116 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Znf235Q61116 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.27■□□□□ 0.36
Znf235Q61116 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.27■□□□□ 0.36
Znf235Q61116 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Znf235Q61116 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Znf235Q61116 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Znf235Q61116 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Znf235Q61116 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Znf235Q61116 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Znf235Q61116 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Znf235Q61116 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Znf235Q61116 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Znf235Q61116 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Znf235Q61116 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44357-201ENSMUST00000195897 142 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm19658-201ENSMUST00000196231 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44367-201ENSMUST00000196836 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44350-201ENSMUST00000197197 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44390-201ENSMUST00000197533 144 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44313-201ENSMUST00000198018 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44486-201ENSMUST00000198508 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44314-201ENSMUST00000199263 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44394-201ENSMUST00000199558 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44484-201ENSMUST00000199873 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44466-201ENSMUST00000200264 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Gm44359-201ENSMUST00000200671 138 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.26■□□□□ 0.35
Znf235Q61116 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.26■□□□□ 0.35
Znf235Q61116 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Znf235Q61116 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Znf235Q61116 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Znf235Q61116 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
Znf235Q61116 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.25■□□□□ 0.35
Znf235Q61116 Mir8098-201ENSMUST00000184011 137 ntBASIC17.25■□□□□ 0.35
Znf235Q61116 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.25■□□□□ 0.35
Znf235Q61116 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.25■□□□□ 0.35
Znf235Q61116 Gm6296-201ENSMUST00000222599 943 ntBASIC17.25■□□□□ 0.35
Znf235Q61116 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Znf235Q61116 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms