Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Gm27000-201ENSMUST00000182943 842 ntBASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43aQ3TL54 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Gm15378-201ENSMUST00000121894 207 ntBASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43aQ3TL54 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim43aQ3TL54 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43aQ3TL54 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.58■□□□□ 0.41
Trim43aQ3TL54 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43aQ3TL54 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms