Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm13216-201ENSMUST00000117145 591 ntBASIC16.65■□□□□ 0.26
Pfdn6Q03958 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm2274-201ENSMUST00000184539 609 ntBASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn6Q03958 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.64■□□□□ 0.25
Pfdn6Q03958 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.64■□□□□ 0.25
Pfdn6Q03958 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.64■□□□□ 0.25
Pfdn6Q03958 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Gm37055-201ENSMUST00000191866 133 ntBASIC16.64■□□□□ 0.25
Pfdn6Q03958 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn6Q03958 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.63■□□□□ 0.25
Pfdn6Q03958 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.63■□□□□ 0.25
Pfdn6Q03958 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn6Q03958 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.62■□□□□ 0.25
Pfdn6Q03958 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.62■□□□□ 0.25
Pfdn6Q03958 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn6Q03958 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pfdn6Q03958 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms