Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Thumpd3P97770 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.96■□□□□ 0.31
Thumpd3P97770 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Thumpd3P97770 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Thumpd3P97770 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Thumpd3P97770 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.95■□□□□ 0.3
Thumpd3P97770 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.95■□□□□ 0.3
Thumpd3P97770 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Thumpd3P97770 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Gm12382-201ENSMUST00000122005 922 ntBASIC16.94■□□□□ 0.3
Thumpd3P97770 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Thumpd3P97770 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.94■□□□□ 0.3
Thumpd3P97770 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Thumpd3P97770 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Gm37292-201ENSMUST00000192062 758 ntBASIC16.93■□□□□ 0.3
Thumpd3P97770 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Gm9987-201ENSMUST00000069768 567 ntBASIC16.93■□□□□ 0.3
Thumpd3P97770 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Thumpd3P97770 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Thumpd3P97770 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd3P97770 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd3P97770 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd3P97770 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd3P97770 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Thumpd3P97770 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms