Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
NclP09405 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC24.63■■□□□ 1.53
NclP09405 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
NclP09405 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC24.63■■□□□ 1.53
NclP09405 AC124569.2-201ENSMUST00000225998 818 ntBASIC24.63■■□□□ 1.53
NclP09405 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
NclP09405 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
NclP09405 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC24.62■■□□□ 1.53
NclP09405 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
NclP09405 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
NclP09405 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC24.62■■□□□ 1.53
NclP09405 Gm43294-201ENSMUST00000202850 2490 ntBASIC24.62■■□□□ 1.53
NclP09405 Gfra2-202ENSMUST00000227633 1480 ntBASIC24.62■■□□□ 1.53
NclP09405 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NclP09405 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC24.61■■□□□ 1.53
NclP09405 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC24.61■■□□□ 1.53
NclP09405 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Gm24589-201ENSMUST00000116692 94 ntBASIC24.61■■□□□ 1.53
NclP09405 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC24.61■■□□□ 1.53
NclP09405 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC24.61■■□□□ 1.53
NclP09405 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
NclP09405 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
NclP09405 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
NclP09405 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
NclP09405 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NclP09405 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC24.6■■□□□ 1.53
NclP09405 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
NclP09405 AC107711.5-202ENSMUST00000226429 702 ntBASIC24.6■■□□□ 1.53
NclP09405 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NclP09405 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC24.6■■□□□ 1.53
NclP09405 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
NclP09405 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC24.59■■□□□ 1.53
NclP09405 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NclP09405 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Gm43338-201ENSMUST00000198617 2223 ntBASIC24.58■■□□□ 1.53
NclP09405 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC24.58■■□□□ 1.53
NclP09405 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
NclP09405 Gm12895-201ENSMUST00000122214 226 ntBASIC24.58■■□□□ 1.53
NclP09405 AC153889.1-201ENSMUST00000219257 330 ntBASIC24.58■■□□□ 1.53
NclP09405 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC24.58■■□□□ 1.53
NclP09405 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
NclP09405 Gm45203-201ENSMUST00000206384 1831 ntBASIC24.58■■□□□ 1.53
NclP09405 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
NclP09405 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
NclP09405 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
NclP09405 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms