Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.16■□□□□ 0.34
Q8CDN1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.16■□□□□ 0.34
Q8CDN1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.16■□□□□ 0.34
Q8CDN1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.16■□□□□ 0.34
Q8CDN1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Q8CDN1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Q8CDN1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Q8CDN1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.15■□□□□ 0.34
Q8CDN1 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.15■□□□□ 0.34
Q8CDN1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.15■□□□□ 0.34
Q8CDN1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.15■□□□□ 0.34
Q8CDN1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.15■□□□□ 0.34
Q8CDN1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Q8CDN1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.15■□□□□ 0.34
Q8CDN1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Q8CDN1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.14■□□□□ 0.34
Q8CDN1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Q8CDN1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q8CDN1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.14■□□□□ 0.33
Q8CDN1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q8CDN1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.14■□□□□ 0.33
Q8CDN1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.14■□□□□ 0.33
Q8CDN1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.14■□□□□ 0.33
Q8CDN1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Q8CDN1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Q8CDN1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.13■□□□□ 0.33
Q8CDN1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Q8CDN1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.13■□□□□ 0.33
Q8CDN1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Q8CDN1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.13■□□□□ 0.33
Q8CDN1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Q8CDN1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Q8CDN1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Q8CDN1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8CDN1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8CDN1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Q8CDN1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.12■□□□□ 0.33
Q8CDN1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.12■□□□□ 0.33
Q8CDN1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8CDN1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8CDN1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Q8CDN1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Q8CDN1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.11■□□□□ 0.33
Q8CDN1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Q8CDN1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Q8CDN1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8CDN1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms