Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Foxd1Q61345 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Foxd1Q61345 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.21■□□□□ 0.67
Foxd1Q61345 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Foxd1Q61345 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Foxd1Q61345 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Foxd1Q61345 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Foxd1Q61345 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Foxd1Q61345 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Foxd1Q61345 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Foxd1Q61345 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.2■□□□□ 0.66
Foxd1Q61345 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.2■□□□□ 0.66
Foxd1Q61345 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Foxd1Q61345 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Foxd1Q61345 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxd1Q61345 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.19■□□□□ 0.66
Foxd1Q61345 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxd1Q61345 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Foxd1Q61345 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Foxd1Q61345 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxd1Q61345 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Foxd1Q61345 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Gm14701-201ENSMUST00000117156 348 ntBASIC19.18■□□□□ 0.66
Foxd1Q61345 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Foxd1Q61345 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxd1Q61345 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.17■□□□□ 0.66
Foxd1Q61345 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.17■□□□□ 0.66
Foxd1Q61345 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Foxd1Q61345 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.17■□□□□ 0.66
Foxd1Q61345 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Foxd1Q61345 Il3ra-202ENSMUST00000223589 738 ntBASIC19.17■□□□□ 0.66
Foxd1Q61345 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Foxd1Q61345 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Foxd1Q61345 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Foxd1Q61345 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms