Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Gm42778-201ENSMUST00000199644 553 ntBASIC20.04■□□□□ 0.8
Mre11Q61216 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Mre11Q61216 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mre11Q61216 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.03■□□□□ 0.8
Mre11Q61216 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Mre11Q61216 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Mre11Q61216 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Mre11Q61216 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mre11Q61216 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
Mre11Q61216 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.02■□□□□ 0.8
Mre11Q61216 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 AC154412.1-201ENSMUST00000226540 2786 ntBASIC20.02■□□□□ 0.8
Mre11Q61216 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.02■□□□□ 0.8
Mre11Q61216 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.02■□□□□ 0.8
Mre11Q61216 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mre11Q61216 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mre11Q61216 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mre11Q61216 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mre11Q61216 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Mre11Q61216 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mre11Q61216 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Mre11Q61216 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.01■□□□□ 0.79
Mre11Q61216 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.01■□□□□ 0.79
Mre11Q61216 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.01■□□□□ 0.79
Mre11Q61216 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mre11Q61216 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Mre11Q61216 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Mre11Q61216 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Gm2399-201ENSMUST00000104944 225 ntBASIC20■□□□□ 0.79
Mre11Q61216 Gm29241-201ENSMUST00000189260 1096 ntBASIC20■□□□□ 0.79
Mre11Q61216 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20■□□□□ 0.79
Mre11Q61216 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mre11Q61216 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Gm11643-201ENSMUST00000119578 864 ntBASIC19.99■□□□□ 0.79
Mre11Q61216 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Mre11Q61216 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mre11Q61216 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.98■□□□□ 0.79
Mre11Q61216 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mre11Q61216 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms