Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Mdc1Q5PSV9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mdc1Q5PSV9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mdc1Q5PSV9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mdc1Q5PSV9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mdc1Q5PSV9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Mdc1Q5PSV9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Gm2213-201ENSMUST00000197485 688 ntBASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Mdc1Q5PSV9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Gm7862-201ENSMUST00000121461 292 ntBASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Gm5264-201ENSMUST00000190584 848 ntBASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mdc1Q5PSV9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.72■■□□□ 1.07
Mdc1Q5PSV9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Gm43575-201ENSMUST00000196420 516 ntBASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mdc1Q5PSV9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Mdc1Q5PSV9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Mir6404-201ENSMUST00000183699 94 ntBASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Gm6376-201ENSMUST00000209407 580 ntBASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms