Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17■□□□□ 0.31
Thumpd3P97770 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17■□□□□ 0.31
Thumpd3P97770 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17■□□□□ 0.31
Thumpd3P97770 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17■□□□□ 0.31
Thumpd3P97770 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17■□□□□ 0.31
Thumpd3P97770 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17■□□□□ 0.31
Thumpd3P97770 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Thumpd3P97770 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.99■□□□□ 0.31
Thumpd3P97770 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.99■□□□□ 0.31
Thumpd3P97770 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.99■□□□□ 0.31
Thumpd3P97770 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.99■□□□□ 0.31
Thumpd3P97770 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Thumpd3P97770 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Thumpd3P97770 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Thumpd3P97770 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Thumpd3P97770 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.97■□□□□ 0.31
Thumpd3P97770 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.97■□□□□ 0.31
Thumpd3P97770 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.97■□□□□ 0.31
Thumpd3P97770 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.97■□□□□ 0.31
Thumpd3P97770 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Thumpd3P97770 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Thumpd3P97770 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Thumpd3P97770 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.96■□□□□ 0.31
Thumpd3P97770 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.96■□□□□ 0.31
Thumpd3P97770 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Thumpd3P97770 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms