Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Uspl1Q3ULM6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uspl1Q3ULM6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
Uspl1Q3ULM6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Uspl1Q3ULM6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Uspl1Q3ULM6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Uspl1Q3ULM6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Uspl1Q3ULM6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Gm29518-201ENSMUST00000190858 372 ntBASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Uspl1Q3ULM6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Gm25016-201ENSMUST00000158399 131 ntBASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Uspl1Q3ULM6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Uspl1Q3ULM6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Uspl1Q3ULM6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Gm17808-201ENSMUST00000200859 894 ntBASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Uspl1Q3ULM6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.52■■□□□ 1.03
Uspl1Q3ULM6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Uspl1Q3ULM6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Uspl1Q3ULM6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Uspl1Q3ULM6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms