Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
Gm5538W4VSP6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Gm5538W4VSP6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.28■■□□□ 1.48
Gm5538W4VSP6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.28■■□□□ 1.48
Gm5538W4VSP6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm5538W4VSP6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.27■■□□□ 1.48
Gm5538W4VSP6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm5538W4VSP6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gm5538W4VSP6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm5538W4VSP6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gm5538W4VSP6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm5538W4VSP6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Gm5538W4VSP6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Gm5538W4VSP6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Gm5538W4VSP6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Gm5538W4VSP6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.23■■□□□ 1.47
Gm5538W4VSP6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Gm5538W4VSP6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.23■■□□□ 1.47
Gm5538W4VSP6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Gm5538W4VSP6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm5538W4VSP6 Gm6821-201ENSMUST00000107540 542 ntBASIC24.22■■□□□ 1.47
Gm5538W4VSP6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.22■■□□□ 1.47
Gm5538W4VSP6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.21■■□□□ 1.47
Gm5538W4VSP6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm5538W4VSP6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.19■■□□□ 1.46
Gm5538W4VSP6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Gm5538W4VSP6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Gm5538W4VSP6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Gm5538W4VSP6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Gm5538W4VSP6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.17■■□□□ 1.46
Gm5538W4VSP6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm5538W4VSP6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm5538W4VSP6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
Gm5538W4VSP6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Gm5538W4VSP6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.16■■□□□ 1.46
Gm5538W4VSP6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Gm5538W4VSP6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Gm5538W4VSP6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.13■■□□□ 1.45
Gm5538W4VSP6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Gm5538W4VSP6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.13■■□□□ 1.45
Gm5538W4VSP6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Gm5538W4VSP6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Gm5538W4VSP6 Gm8503-201ENSMUST00000118131 455 ntBASIC24.12■■□□□ 1.45
Gm5538W4VSP6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Gm5538W4VSP6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm5538W4VSP6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Gm5538W4VSP6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.11■■□□□ 1.45
Gm5538W4VSP6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Gm5538W4VSP6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm5538W4VSP6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Gm5538W4VSP6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Gm5538W4VSP6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gm5538W4VSP6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Gm5538W4VSP6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.08■■□□□ 1.45
Gm5538W4VSP6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.07■■□□□ 1.44
Gm5538W4VSP6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Gm5538W4VSP6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Gm5538W4VSP6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Gm5538W4VSP6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm5538W4VSP6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Gm5538W4VSP6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.03■■□□□ 1.44
Gm5538W4VSP6 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.02■■□□□ 1.44
Gm5538W4VSP6 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.02■■□□□ 1.44
Gm5538W4VSP6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.02■■□□□ 1.44
Gm5538W4VSP6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Gm5538W4VSP6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Gm5538W4VSP6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Gm5538W4VSP6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Gm5538W4VSP6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Gm5538W4VSP6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm5538W4VSP6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.97■■□□□ 1.43
Gm5538W4VSP6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Gm5538W4VSP6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm5538W4VSP6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm5538W4VSP6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm5538W4VSP6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm5538W4VSP6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm5538W4VSP6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Gm5538W4VSP6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm5538W4VSP6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm5538W4VSP6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Gm5538W4VSP6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Gm5538W4VSP6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm5538W4VSP6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Gm5538W4VSP6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm5538W4VSP6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm5538W4VSP6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm5538W4VSP6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm5538W4VSP6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm5538W4VSP6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm5538W4VSP6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Gm5538W4VSP6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Gm5538W4VSP6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm5538W4VSP6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm5538W4VSP6 Particl-201ENSMUST00000205370 1560 ntBASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms