Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
H2afb1S4R1E0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H2afb1S4R1E0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb1S4R1E0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.12■□□□□ 0.97
H2afb1S4R1E0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb1S4R1E0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb1S4R1E0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H2afb1S4R1E0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
H2afb1S4R1E0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb1S4R1E0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb1S4R1E0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.09■□□□□ 0.97
H2afb1S4R1E0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
H2afb1S4R1E0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
H2afb1S4R1E0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb1S4R1E0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
H2afb1S4R1E0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H2afb1S4R1E0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2afb1S4R1E0 Gm45855-201ENSMUST00000212546 880 ntBASIC21.07■□□□□ 0.96
H2afb1S4R1E0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb1S4R1E0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.06■□□□□ 0.96
H2afb1S4R1E0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb1S4R1E0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb1S4R1E0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb1S4R1E0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb1S4R1E0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb1S4R1E0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb1S4R1E0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb1S4R1E0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb1S4R1E0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.01■□□□□ 0.95
H2afb1S4R1E0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb1S4R1E0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afb1S4R1E0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb1S4R1E0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
H2afb1S4R1E0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb1S4R1E0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb1S4R1E0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb1S4R1E0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb1S4R1E0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb1S4R1E0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb1S4R1E0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1S4R1E0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1S4R1E0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1S4R1E0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb1S4R1E0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb1S4R1E0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb1S4R1E0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.95■□□□□ 0.94
H2afb1S4R1E0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb1S4R1E0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.94■□□□□ 0.94
H2afb1S4R1E0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb1S4R1E0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
H2afb1S4R1E0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.93■□□□□ 0.94
H2afb1S4R1E0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb1S4R1E0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb1S4R1E0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
H2afb1S4R1E0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb1S4R1E0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb1S4R1E0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb1S4R1E0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb1S4R1E0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb1S4R1E0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
H2afb1S4R1E0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb1S4R1E0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb1S4R1E0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb1S4R1E0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb1S4R1E0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb1S4R1E0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb1S4R1E0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1S4R1E0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb1S4R1E0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms