Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cngb3Q9JJZ9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cngb3Q9JJZ9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Cngb3Q9JJZ9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Cngb3Q9JJZ9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cngb3Q9JJZ9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Cngb3Q9JJZ9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cngb3Q9JJZ9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cngb3Q9JJZ9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cngb3Q9JJZ9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.34■■□□□ 1.33
Cngb3Q9JJZ9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cngb3Q9JJZ9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Cngb3Q9JJZ9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.34■■□□□ 1.33
Cngb3Q9JJZ9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cngb3Q9JJZ9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cngb3Q9JJZ9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.32■■□□□ 1.32
Cngb3Q9JJZ9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Cngb3Q9JJZ9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cngb3Q9JJZ9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cngb3Q9JJZ9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cngb3Q9JJZ9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cngb3Q9JJZ9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cngb3Q9JJZ9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cngb3Q9JJZ9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cngb3Q9JJZ9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cngb3Q9JJZ9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cngb3Q9JJZ9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cngb3Q9JJZ9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cngb3Q9JJZ9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cngb3Q9JJZ9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cngb3Q9JJZ9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Cngb3Q9JJZ9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cngb3Q9JJZ9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cngb3Q9JJZ9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cngb3Q9JJZ9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cngb3Q9JJZ9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cngb3Q9JJZ9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cngb3Q9JJZ9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cngb3Q9JJZ9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cngb3Q9JJZ9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cngb3Q9JJZ9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Cngb3Q9JJZ9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cngb3Q9JJZ9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cngb3Q9JJZ9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cngb3Q9JJZ9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
Cngb3Q9JJZ9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.18■■□□□ 1.3
Cngb3Q9JJZ9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.18■■□□□ 1.3
Cngb3Q9JJZ9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cngb3Q9JJZ9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.17■■□□□ 1.3
Cngb3Q9JJZ9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cngb3Q9JJZ9 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.17■■□□□ 1.3
Cngb3Q9JJZ9 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.17■■□□□ 1.3
Cngb3Q9JJZ9 Particl-201ENSMUST00000205370 1560 ntBASIC23.15■■□□□ 1.3
Cngb3Q9JJZ9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Cngb3Q9JJZ9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cngb3Q9JJZ9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cngb3Q9JJZ9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cngb3Q9JJZ9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.14■■□□□ 1.29
Cngb3Q9JJZ9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cngb3Q9JJZ9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cngb3Q9JJZ9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cngb3Q9JJZ9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cngb3Q9JJZ9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cngb3Q9JJZ9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cngb3Q9JJZ9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cngb3Q9JJZ9 Nkain2-201ENSMUST00000092602 558 ntBASIC23.11■■□□□ 1.29
Cngb3Q9JJZ9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Cngb3Q9JJZ9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cngb3Q9JJZ9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cngb3Q9JJZ9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Cngb3Q9JJZ9 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.1■■□□□ 1.29
Cngb3Q9JJZ9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Cngb3Q9JJZ9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cngb3Q9JJZ9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cngb3Q9JJZ9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cngb3Q9JJZ9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cngb3Q9JJZ9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cngb3Q9JJZ9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cngb3Q9JJZ9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cngb3Q9JJZ9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cngb3Q9JJZ9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.06■■□□□ 1.28
Cngb3Q9JJZ9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cngb3Q9JJZ9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cngb3Q9JJZ9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cngb3Q9JJZ9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Cngb3Q9JJZ9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cngb3Q9JJZ9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Cngb3Q9JJZ9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cngb3Q9JJZ9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms